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A parser for FASTA files.
Copyright (C) 2003, 2004 by BiRC -- Bioinformatics Research Center
University of Aarhus, Denmark
Contact: Thomas Mailund <mailund@birc.dk>
with changes by Asa Ben-Hur
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MalformedInput Exception raised when the input file does not look like a fasta file. |
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FastaRecord a fasta record. |
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fasta_itr An iterator through a sequence of fasta records. |
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fasta_slice Provide an iteration through the fasta records in 'src', from 'start' to 'stop'. |
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Provide an iteration through the fasta records in file `src'. Here `src' can be either a file object or the name of a file. |
split a fasta file into a given number of files the resulting files are named by adding a number to the provided file name. :Parameters: - `fileName` - the fasta file to split - `num_files` - the number of files to split into - `directory` - the directory into which to write the files |
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